Package: hbim 1.1.2
hbim: Hill/Bliss Independence Model for Combination Vaccines
Calculate expected relative risk and proportion protected assuming normally distributed log10 transformed antibody dose for a several component vaccine. Uses Hill models for each component which are combined under Bliss independence. See Saul and Fay, 2007 <doi:10.1371/journal.pone.0000850>.
Authors:
hbim_1.1.2.tar.gz
hbim_1.1.2.zip(r-4.7-any)hbim_1.1.2.zip(r-4.6-any)hbim_1.1.2.zip(r-4.5-any)
hbim_1.1.2.tgz(r-4.6-any)hbim_1.1.2.tgz(r-4.5-any)
hbim_1.1.2.tar.gz(r-4.7-any)hbim_1.1.2.tar.gz(r-4.6-any)
hbim_1.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
hbim/json (API)
| # Install 'hbim' in R: |
| install.packages('hbim', repos = c('https://michaelfay-niaid.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:9f0c312dc0. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 114 | ||
| source / vignettes | OK | 206 | ||
| linux-release-x86_64 | NOTE | 109 | ||
| macos-release-arm64 | NOTE | 89 | ||
| macos-oldrel-arm64 | NOTE | 103 | ||
| windows-devel | NOTE | 66 | ||
| windows-release | NOTE | 71 | ||
| windows-oldrel | NOTE | 58 | ||
| wasm-release | OK | 85 |
Exports:calc.foldrangeeff.mueff.rhoeff.sigmaequiv.abequiv.increasehbpphbpp.integrate1hbpp.integrate2hbpp.integrate3hbpp.simulatehbrrhbrr.integrate1hbrr.integrate2hbrr.integrate2.rhoeq1hbrr.integrate3hbrr.integrate3.rhoeq1hbrr.simulatemake.vplotlogm.respplotresp.equivplotresp.mixpp.mupp.rhopp.sigma
Dependencies:mvtnorm
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Hill/Bliss Independence Model for Multicomponent Vaccines | hbim-package hbim |
| Calculate stadard error and fold-range from confidence interval | calc.foldrange |
| HBIM data | deff.mu deff.rho deff.sigma dpp.mu dpp.rho dpp.sigma |
| Create data sets for plots | eff.mu eff.rho eff.sigma pp.mu pp.rho pp.sigma |
| Equivalent antibody calculations by Linear Interpolation | equiv.ab |
| Calculate equivalent increase from two dose-response curves | equiv.increase |
| Calculate expected relative risk or percent protected from Hill model with Bliss Independence | hbpp hbrr |
| Immune Response data | irdata |
| Make Exchangeable Variance Matrix | make.v |
| Plot Hill/Bliss Independence Model Data. | plotlogm.resp plotresp.equiv plotresp.mix |
| Reference list | refs |
