Introduction | Background on interval-censored data analysis methods | Mathematical formulation of the scores for the WLRT | Application | The perm package | The interval package
Package: interval 1.1-1.0
interval: Weighted Logrank Tests and NPMLE for Interval Censored Data
Functions to fit nonparametric survival curves, plot them, and perform logrank or Wilcoxon type tests [see Fay and Shaw <doi:10.18637/jss.v036.i02>].
Authors:
interval_1.1-1.0.tar.gz
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interval_1.1-1.0.tgz(r-4.6-any)interval_1.1-1.0.tgz(r-4.5-any)
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interval_1.1-1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
interval/json (API)
| # Install 'interval' in R: |
| install.packages('interval', repos = c('https://michaelfay-niaid.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- bcos - Breast Cosmesis Data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:0b6ec1560e. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 105 | ||
| source / vignettes | OK | 169 | ||
| linux-release-x86_64 | NOTE | 119 | ||
| macos-release-arm64 | NOTE | 105 | ||
| macos-oldrel-arm64 | NOTE | 89 | ||
| windows-devel | NOTE | 85 | ||
| windows-release | NOTE | 90 | ||
| windows-oldrel | NOTE | 89 | ||
| wasm-release | OK | 92 |
Exports:AintmapgetsurvicfiticfitBootCIicfitControlicScoreTestictesticWSRinitcomputeMLEinitEMICMmControlmethodRuleIC1scoresFromFitSurvLRwlr_trafowsrHLYpcltwsrMC
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Tests and NPMLE for interval censored data | interval-package interval |
| Create A matrix and intmap | Aintmap |
| Breast Cosmesis Data | bcos |
| get survival values from icfit object | getsurv |
| calculate non-parametric MLE for interval censored survival function | icfit icfit.default icfit.formula |
| Auxiliary for controling icfit | icfitControl |
| do logrank or Wilcoxon type tests on interval censored data | ictest ictest.default ictest.formula wlr_trafo wlr_trafo.data.frame wlr_trafo.default wlr_trafo.Surv |
| functions to calculate initial NPMLE of the distribution | initcomputeMLE initEMICM |
| Auxiliary for feeding parameters to different methods | mControl |
| Rule for determining method for ictest | methodRuleIC1 |
| Plot icfit object | plot.icfit |
| Methods for icfit objects | print.icfit summary.icfit [.icfit |
| Transform Surv object to data frame with L and R values | SurvLR |
