{ "_id": "6a1f1795b401979e7341eb12", "Package": "choplump", "Type": "Package", "Title": "Permutation Test for Some Positive and Many Zero Responses", "Version": "1.1.2", "Date": "2024-01-25", "Author": "Michael P. Fay", "Maintainer": "Michael P. Fay ", "Description": "Calculates permutation tests that can be powerful for\ncomparing two groups with some positive but many zero responses\n(see Follmann, Fay, and Proschan\n).", "License": "GPL-3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-17 05:57:26 UTC", "User": "root" }, "Repository": "https://michaelfay-niaid.r-universe.dev", "Date/Publication": "2024-01-26 02:39:02 UTC", "RemoteUrl": "https://github.com/cran/choplump", "RemoteRef": "HEAD", "RemoteSha": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "MD5sum": "f312859189ce81a4995b6a8e37efd6f8", "_user": "michaelfay-niaid", "_type": "src", "_file": "choplump_1.1.2.tar.gz", "_fileid": "7ed2bee990c48460357bffa7bed28adcd7c7ecfa57e862166c606097d88406e0", "_filesize": 664691, "_sha256": "7ed2bee990c48460357bffa7bed28adcd7c7ecfa57e862166c606097d88406e0", "_created": "2026-05-17T05:57:26.000Z", "_published": "2026-06-02T17:49:09.794Z", "_distro": "noble", "_jobs": [ { "job": 79135960137, "time": 104, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7039811831" }, { "job": 79135960758, "time": 110, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7039812393" }, { "job": 79135960479, "time": 72, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7039808721" }, { "job": 79135960060, "time": 107, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7039812026" }, { "job": 79135960028, "time": 179, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7039800553" }, { "job": 79135959599, "time": 83, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7365575807" }, { "job": 79135960348, "time": 56, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7039806944" }, { "job": 79135961020, "time": 56, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7039806837" }, { "job": 79135960215, "time": 62, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7039807650" } ], "_buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/choplump", "_commit": { "id": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "author": "Michael P. Fay ", "committer": "cran-robot ", "message": "version 1.1.2\n", "time": 1706236742 }, "_maintainer": { "name": "Michael P. Fay", "email": "mfay@niaid.nih.gov", "login": "michaelfay-niaid", "description": "I am a biostatistician and maintain several R packages,", "uuid": 212777592 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.5.0", "role": "Depends" }, { "package": "stats", "role": "Depends" }, { "package": "coin", "role": "Suggests" }, { "package": "survival", "role": "Suggests" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "michaelfay-niaid", "count": 8, "uuid": 212777592 } ], "_userbio": { "uuid": 212777592, "type": "user", "name": "Michael P Fay", "description": "I am a biostatistician and maintain several R packages," }, "_downloads": { "count": 245, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/choplump" }, "_searchresults": 6, "_rbuild": "4.6.0", "_assets": [ "extra/choplump.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "manual.pdf" ], "_realowner": "michaelfay-niaid", "_cranurl": false, "_releases": [ { "version": "0.9-3", "date": "2007-09-04" }, { "version": "1.0", "date": "2009-10-13" }, { "version": "1.0-0.1", "date": "2010-07-30" }, { "version": "1.0-0.2", "date": "2012-03-21" }, { "version": "1.0-0.3", "date": "2014-01-23" }, { "version": "1.0-0.4", "date": "2014-11-24" }, { "version": "1.1.1", "date": "2022-05-09" }, { "version": "1.1.2", "date": "2024-01-25" } ], "_exports": [ "chooseMatrix", "chop", "chopGeneral", "choplump", "choplumpApprox", "choplumpExact", "choplumpExactMC", "choplumpGeneral", "cm.compact", "methodRule1", "Qh.times.dhyper", "TDiM", "testfunc.DiM", "testfunc.wilcox", "testfunc.wilcox.general", "testfunc.wilcox.ties", "testfunc.wilcox.ties.general", "wilcox.manyzeros.exact" ], "_help": [ { "page": "choplump-package", "title": "Permutation Test for Some Positive and Many Zero Responses", "topics": [ "choplump-package" ] }, { "page": "chooseMatrix", "title": "Create an (n choose m) by n matrix with unique rows.", "topics": [ "chooseMatrix" ] }, { "page": "choplump", "title": "Choplump Test", "topics": [ "choplump", "choplump.default", "choplump.formula" ] }, { "page": "choplumpGeneral", "title": "General choplump test", "topics": [ "choplumpGeneral" ] }, { "page": "methodRule1", "title": "Rule for determining method for choplump function", "topics": [ "methodRule1" ] }, { "page": "wilcox.manyzeros.exact", "title": "Wilcoxon Rank Sum Test", "topics": [ "wilcox.manyzeros.exact" ] } ], "_rundeps": [], "_vignettes": [ { "source": "choplumpValidation.Rnw", "filename": "choplumpValidation.pdf", "title": "Validation of choplump R package", "engine": "utils::Sweave", "headings": [], "created": "2014-01-22", "modified": "2014-01-22", "commits": 1 } ], "_score": 2, "_indexed": true, "_nocasepkg": "choplump", "_universes": [ "michaelfay-niaid" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.2", "date": "2026-05-17T05:59:17.000Z", "distro": "noble", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "52b82c0c94e2f6aaf75ff1f4f146dcfdada9683ba92549331ddb0b7658d6e5fb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.6.0", "os": "linux", "version": "1.1.2", "date": "2026-05-17T05:59:21.000Z", "distro": "noble", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "86ec530e51ca6bf45ae57ddbf64da42775de461435b0eed74b995524a786eef0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.5.3", "os": "mac", "version": "1.1.2", "date": "2026-05-17T05:58:50.000Z", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "a14ef26153845d8783a9a48b91948bc34abb46e131e6e35d6e2baa887cd40dac", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.6.0", "os": "mac", "version": "1.1.2", "date": "2026-05-17T05:59:20.000Z", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "1ef2dfb9995ac0097f66780a9e159588fa0d098a5e85dd58f68450a84879e890", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.7.0", "os": "win", "version": "1.1.2", "date": "2026-05-17T05:58:27.000Z", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "6663b581125341f339bdd6872c6a3cb236cb7195b02801b66ea64562a749fe07", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.5.3", "os": "win", "version": "1.1.2", "date": "2026-05-17T05:58:26.000Z", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "3e4604605541df95d077fc374268b399fa0de254ffe89b8b4541674d707d9d5a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.6.0", "os": "win", "version": "1.1.2", "date": "2026-05-17T05:58:32.000Z", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "306d5ce55836cd38ae1c4d03344e835b7d71f5caba22b819716e997813096b50", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.2", "date": "2026-06-02T17:48:56.000Z", "commit": "ccdb4e1ca96c3cf507b341990606d4abeedef7b8", "fileid": "ad199b5e58fbeb8fa58d30edadcb0bad3ec412bcdc62e674655a54883419af3f", "status": "success", "buildurl": "https://github.com/r-universe/michaelfay-niaid/actions/runs/25982870006" } ] }